Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 ACKR1-201ENST00000368121 1240 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 DDX39AP1-201ENST00000445147 1181 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 POU5F1P6-201ENST00000466990 990 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AL157792.1-201ENST00000488281 530 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 RPL17P45-201ENST00000586289 509 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC087045.2-201ENST00000606279 1003 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC091544.8-201ENST00000619490 361 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 AC006335.1-201ENST00000445200 547 ntBASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD1Q96PZ7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 FTLP5-201ENST00000586853 534 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AC093813.1-201ENST00000605066 256 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AC092171.5-201ENST00000608012 942 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AC010491.1-201ENST00000563101 2797 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 LINC00554-201ENST00000564841 3011 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AL133466.1-201ENST00000447582 150 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AC138894.2-201ENST00000602838 371 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 HIST2H2BB-201ENST00000449108 381 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 RPL18P13-201ENST00000478088 569 ntBASIC13.19□□□□□ -0.3
CSMD1Q96PZ7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 SCARNA21-201ENST00000517026 139 ntBASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 AD000864.1-201ENST00000624076 2295 ntBASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms