Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX21Q969T3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX21Q969T3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX21Q969T3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX21Q969T3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.68■□□□□ 0.58
SNX21Q969T3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX21Q969T3 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX21Q969T3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX21Q969T3 AC064836.3-201ENST00000607928 673 ntBASIC18.68■□□□□ 0.58
SNX21Q969T3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SNX21Q969T3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SNX21Q969T3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX21Q969T3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX21Q969T3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNX21Q969T3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX21Q969T3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNX21Q969T3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 MIR346-201ENST00000362234 95 ntBASIC18.67■□□□□ 0.58
SNX21Q969T3 GHSR-202ENST00000427970 912 ntBASIC18.67■□□□□ 0.58
SNX21Q969T3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.67■□□□□ 0.58
SNX21Q969T3 AC112191.1-201ENST00000523689 701 ntBASIC18.67■□□□□ 0.58
SNX21Q969T3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX21Q969T3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.67■□□□□ 0.58
SNX21Q969T3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.67■□□□□ 0.58
SNX21Q969T3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNX21Q969T3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX21Q969T3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX21Q969T3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNX21Q969T3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SNX21Q969T3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 BX640514.1-201ENST00000583223 1918 ntBASIC18.66■□□□□ 0.58
SNX21Q969T3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNX21Q969T3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX21Q969T3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNX21Q969T3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNX21Q969T3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX21Q969T3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SNX21Q969T3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX21Q969T3 AZGP1P1-201ENST00000411909 902 ntBASIC18.66■□□□□ 0.58
SNX21Q969T3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX21Q969T3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNX21Q969T3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SNX21Q969T3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX21Q969T3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX21Q969T3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SNX21Q969T3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX21Q969T3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX21Q969T3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms