Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 ACTBP8-201ENST00000403258 1108 ntBASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AC018695.7-201ENST00000624587 2492 ntBASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 AC079328.2-201ENST00000561241 3354 ntBASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 RNU1-114P-201ENST00000365297 166 ntBASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 KLF2P2-201ENST00000416807 1039 ntBASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 AL591846.1-201ENST00000451736 433 ntBASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAPGEF4Q8WZA2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 CD8B2-202ENST00000417670 633 ntBASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 HOMER2P2-201ENST00000451621 847 ntBASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 AC005695.3-201ENST00000614522 232 ntBASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 AL008638.5-201ENST00000623814 1298 ntBASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAPGEF4Q8WZA2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms