Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AL442647.2-201ENST00000429864 857 ntBASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AC234783.1-201ENST00000441761 496 ntBASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 CROCCP4-201ENST00000457096 498 ntBASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 SNX29P1-201ENST00000548357 1007 ntBASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AC134407.2-201ENST00000625089 1978 ntBASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHKBP1Q8TBC3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 AP001282.1-201ENST00000531301 1499 ntBASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 AC092384.3-202ENST00000564646 2873 ntBASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 FAM86LP-201ENST00000478302 853 ntBASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 USP32P1-208ENST00000506594 1164 ntBASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.55■□□□□ 0.24
SHKBP1Q8TBC3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 PHKG1P2-201ENST00000457537 863 ntBASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 BRI3BPP1-201ENST00000594224 787 ntBASIC16.54■□□□□ 0.24
SHKBP1Q8TBC3 BTNL10-201ENST00000595971 695 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms