Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC131009.4-201ENST00000624048 1740 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 MTCYBP11-201ENST00000447254 1109 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC005412.3-201ENST00000580309 715 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC093783.1-201ENST00000612976 329 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC093028.1-201ENST00000622998 982 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AC092964.1-201ENST00000623304 1399 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 AL353732.1-201ENST00000569618 1459 ntBASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EFCAB3Q8N7B9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 ACTG1P14-201ENST00000446382 1122 ntBASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AP000344.2-201ENST00000512987 629 ntBASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AC013467.2-201ENST00000605472 835 ntBASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AL009178.2-201ENST00000597278 2719 ntBASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 AC099063.4-201ENST00000641099 1602 ntBASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
EFCAB3Q8N7B9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms