Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AC136604.1-201ENST00000418535 575 ntBASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AP001582.1-201ENST00000525856 295 ntBASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.61■□□□□ 0.09
TMEFF1Q8IYR6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 KRT18P43-201ENST00000469825 1281 ntBASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 AC022137.2-201ENST00000503482 481 ntBASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 AC023310.1-201ENST00000554836 735 ntBASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEFF1Q8IYR6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.59■□□□□ 0.09
TMEFF1Q8IYR6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms