Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00346Q8IVM7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.02□□□□□ -0.16
LINC00346Q8IVM7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC004461.1-201ENST00000412461 403 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 FAM58DP-201ENST00000428076 619 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC026979.3-201ENST00000607315 403 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC055717.3-201ENST00000622967 595 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC084121.4-201ENST00000641598 221 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AF228730.8-201ENST00000642140 221 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AL109954.1-202ENST00000564051 2148 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 AC023157.3-201ENST00000619086 2088 ntBASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00346Q8IVM7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 ALG1L8P-201ENST00000533887 760 ntBASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 AL513210.1-201ENST00000629608 234 ntBASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00346Q8IVM7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms