Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 AC091812.2-201ENST00000619081 385 ntBASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AP002414.1-201ENST00000391405 1147 ntBASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AL359183.1-201ENST00000623796 2132 ntBASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 CICP17-201ENST00000418553 2377 ntBASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
FOXR1Q6PIV2 AC009336.1-201ENST00000608941 1553 ntBASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FOXR1Q6PIV2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms