Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AC007292.2-201ENST00000593524 1812 ntBASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ALG1L5P-201ENST00000482043 771 ntBASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AC092865.5-201ENST00000545435 363 ntBASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AC026120.1-201ENST00000611536 926 ntBASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ATPAF1Q5TC12 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
ATPAF1Q5TC12 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CEND1P1-201ENST00000451006 455 ntBASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.77□□□□□ -0.21
ATPAF1Q5TC12 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms