Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AC026410.3-201ENST00000514280 936 ntBASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 FLJ16779-201ENST00000612722 7638 ntBASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 DRD5P1-201ENST00000456605 1438 ntBASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 REXO1L6P-201ENST00000603433 1515 ntBASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 AC092933.1-201ENST00000393644 945 ntBASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 KLF2P4-201ENST00000451959 1225 ntBASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 AC022726.2-201ENST00000634673 547 ntBASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNFT1Q5M7Z0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
RNFT1Q5M7Z0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
RNFT1Q5M7Z0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 BAATP1-201ENST00000412284 1225 ntBASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RNFT1Q5M7Z0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms