Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 AF186996.4-201ENST00000467186 377 ntBASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 UNC93B7-201ENST00000509439 705 ntBASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ANKRD55Q3KP44 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 MYO15B-237ENST00000642007 4893 ntBASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 AC093909.1-201ENST00000504731 1122 ntBASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 MIR4321-201ENST00000592276 80 ntBASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ANKRD55Q3KP44 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms