Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AC106881.1-201ENST00000605849 3329 ntBASIC14.06□□□□□ -0.16
ODF4Q2M2E3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 KRT19P2-202ENST00000557173 1012 ntBASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AC002347.1-201ENST00000569543 541 ntBASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AC064836.3-201ENST00000607928 673 ntBASIC14.06□□□□□ -0.16
ODF4Q2M2E3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 WASH6P-202ENST00000359512 1437 ntBASIC14.06□□□□□ -0.16
ODF4Q2M2E3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ODF4Q2M2E3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.05□□□□□ -0.16
ODF4Q2M2E3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 RNA5SP419-201ENST00000515908 135 ntBASIC14.05□□□□□ -0.16
ODF4Q2M2E3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.05□□□□□ -0.16
ODF4Q2M2E3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 AP001282.1-201ENST00000531301 1499 ntBASIC14.05□□□□□ -0.16
ODF4Q2M2E3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.05□□□□□ -0.16
ODF4Q2M2E3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms