Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.23□□□□□ -0.61
RPL39P62891 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.23□□□□□ -0.61
RPL39P62891 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RPL39P62891 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 MROH4P-201ENST00000431302 1578 ntBASIC11.23□□□□□ -0.61
RPL39P62891 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 GRK6P1-201ENST00000400595 1711 ntBASIC11.23□□□□□ -0.61
RPL39P62891 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.23□□□□□ -0.61
RPL39P62891 AC148477.4-201ENST00000613430 1793 ntBASIC11.23□□□□□ -0.61
RPL39P62891 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 AC023024.2-201ENST00000623561 1993 ntBASIC11.23□□□□□ -0.61
RPL39P62891 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.23□□□□□ -0.61
RPL39P62891 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RPL39P62891 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RPL39P62891 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.22□□□□□ -0.61
RPL39P62891 INTS4P1-203ENST00000641008 3683 ntBASIC11.22□□□□□ -0.61
RPL39P62891 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RPL39P62891 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 HMGA1P7-201ENST00000406908 502 ntBASIC11.22□□□□□ -0.61
RPL39P62891 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 PMS2P4-201ENST00000412466 1052 ntBASIC11.22□□□□□ -0.61
RPL39P62891 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.22□□□□□ -0.61
RPL39P62891 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 SCARNA2-201ENST00000458748 420 ntBASIC11.22□□□□□ -0.61
RPL39P62891 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.22□□□□□ -0.61
RPL39P62891 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.22□□□□□ -0.61
RPL39P62891 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.22□□□□□ -0.61
RPL39P62891 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.22□□□□□ -0.61
RPL39P62891 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RPL39P62891 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.21□□□□□ -0.61
RPL39P62891 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.21□□□□□ -0.61
RPL39P62891 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RPL39P62891 AC127383.1-201ENST00000444697 1800 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms