Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
CDH8P55286 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH8P55286 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH8P55286 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 AL132655.2-201ENST00000596276 594 ntBASIC16.81■□□□□ 0.28
CDH8P55286 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH8P55286 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH8P55286 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH8P55286 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH8P55286 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH8P55286 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 AC105250.1-201ENST00000509378 2057 ntBASIC16.8■□□□□ 0.28
CDH8P55286 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH8P55286 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH8P55286 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH8P55286 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH8P55286 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 AL035633.1-201ENST00000406139 838 ntBASIC16.79■□□□□ 0.28
CDH8P55286 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CDH8P55286 CHCHD2P3-201ENST00000603038 451 ntBASIC16.79■□□□□ 0.28
CDH8P55286 AL158212.4-201ENST00000624062 1286 ntBASIC16.79■□□□□ 0.28
CDH8P55286 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH8P55286 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH8P55286 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH8P55286 CLK3P2-201ENST00000427566 1453 ntBASIC16.79■□□□□ 0.28
CDH8P55286 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms