Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC126177.1-201ENST00000547829 2218 ntBASIC16.67■□□□□ 0.26
TUBP50607 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TUBP50607 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBP50607 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBP50607 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBP50607 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBP50607 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TUBP50607 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
TUBP50607 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TUBP50607 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBP50607 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBP50607 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.67■□□□□ 0.26
TUBP50607 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TUBP50607 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 AC087499.6-201ENST00000411576 835 ntBASIC16.66■□□□□ 0.26
TUBP50607 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.66■□□□□ 0.26
TUBP50607 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 AC005225.4-201ENST00000557330 545 ntBASIC16.66■□□□□ 0.26
TUBP50607 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 AC025048.6-201ENST00000634326 1161 ntBASIC16.66■□□□□ 0.26
TUBP50607 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TUBP50607 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 AC007541.1-201ENST00000570282 1469 ntBASIC16.66■□□□□ 0.26
TUBP50607 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TUBP50607 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.66■□□□□ 0.26
TUBP50607 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBP50607 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TUBP50607 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBP50607 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TUBP50607 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 SPDYE19P-201ENST00000338590 713 ntBASIC16.65■□□□□ 0.26
TUBP50607 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.65■□□□□ 0.26
TUBP50607 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 API5-211ENST00000534695 560 ntTSL 5 BASIC16.65■□□□□ 0.26
TUBP50607 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 TP53TG3HP-202ENST00000569755 579 ntBASIC16.65■□□□□ 0.26
TUBP50607 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.65■□□□□ 0.26
TUBP50607 AC140912.1-201ENST00000577171 1054 ntBASIC16.65■□□□□ 0.26
TUBP50607 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 AC099568.2-201ENST00000609194 695 ntBASIC16.65■□□□□ 0.26
TUBP50607 AC012645.4-201ENST00000610691 1061 ntBASIC16.65■□□□□ 0.26
TUBP50607 AC004790.1-201ENST00000612686 536 ntBASIC16.65■□□□□ 0.26
TUBP50607 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.65■□□□□ 0.26
TUBP50607 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.65■□□□□ 0.26
TUBP50607 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TUBP50607 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms