Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 KLF2P3-201ENST00000451977 1087 ntBASIC14.09□□□□□ -0.15
CSNK1A1P48729 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 GPALPP1-207ENST00000611650 899 ntBASIC14.09□□□□□ -0.15
CSNK1A1P48729 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CSNK1A1P48729 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSNK1A1P48729 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSNK1A1P48729 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSNK1A1P48729 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.08□□□□□ -0.15
CSNK1A1P48729 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC107890.1-201ENST00000422478 521 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 HLA-V-204ENST00000476601 1289 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC069120.2-201ENST00000524091 540 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 HNRNPUP1-201ENST00000554987 333 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 MIR4313-201ENST00000580760 101 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC015911.4-201ENST00000588022 1070 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 MIR6069-201ENST00000620069 79 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms