Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SOX2P48431 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SOX2P48431 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SOX2P48431 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SOX2P48431 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SOX2P48431 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.97□□□□□ -0.17
SOX2P48431 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.97□□□□□ -0.17
SOX2P48431 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.97□□□□□ -0.17
SOX2P48431 PRYP6-201ENST00000514804 343 ntBASIC13.97□□□□□ -0.17
SOX2P48431 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.97□□□□□ -0.17
SOX2P48431 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.97□□□□□ -0.17
SOX2P48431 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SOX2P48431 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SOX2P48431 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SOX2P48431 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SOX2P48431 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.96□□□□□ -0.17
SOX2P48431 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SOX2P48431 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.96□□□□□ -0.17
SOX2P48431 HCG4B-203ENST00000450128 991 ntBASIC13.96□□□□□ -0.17
SOX2P48431 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.96□□□□□ -0.17
SOX2P48431 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.96□□□□□ -0.17
SOX2P48431 UNC93B6-202ENST00000528242 690 ntBASIC13.96□□□□□ -0.17
SOX2P48431 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.96□□□□□ -0.17
SOX2P48431 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.96□□□□□ -0.17
SOX2P48431 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.96□□□□□ -0.17
SOX2P48431 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.96□□□□□ -0.17
SOX2P48431 AC067750.1-201ENST00000608826 6545 ntBASIC13.96□□□□□ -0.17
SOX2P48431 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.96□□□□□ -0.17
SOX2P48431 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SOX2P48431 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SOX2P48431 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.96□□□□□ -0.18
SOX2P48431 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SOX2P48431 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SOX2P48431 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SOX2P48431 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SOX2P48431 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SOX2P48431 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SOX2P48431 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms