Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 FAM58DP-201ENST00000428076 619 ntBASIC16.53■□□□□ 0.24
SLC1A1P43005 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC1A1P43005 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC1A1P43005 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.53■□□□□ 0.24
SLC1A1P43005 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
SLC1A1P43005 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC1A1P43005 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.53■□□□□ 0.24
SLC1A1P43005 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.53■□□□□ 0.24
SLC1A1P43005 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.53■□□□□ 0.24
SLC1A1P43005 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SLC1A1P43005 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SLC1A1P43005 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SLC1A1P43005 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 AL035456.1-201ENST00000456064 1369 ntBASIC16.52■□□□□ 0.24
SLC1A1P43005 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SLC1A1P43005 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SLC1A1P43005 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SLC1A1P43005 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC1A1P43005 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC1A1P43005 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SLC1A1P43005 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC1A1P43005 AC004461.1-201ENST00000412461 403 ntBASIC16.52■□□□□ 0.24
SLC1A1P43005 HIST3H2BA-201ENST00000436555 524 ntBASIC16.52■□□□□ 0.24
SLC1A1P43005 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC1A1P43005 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC1A1P43005 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SLC1A1P43005 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SLC1A1P43005 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC1A1P43005 AL671883.3-201ENST00000603274 991 ntBASIC16.52■□□□□ 0.24
SLC1A1P43005 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC1A1P43005 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC1A1P43005 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
SLC1A1P43005 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC1A1P43005 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.52■□□□□ 0.23
SLC1A1P43005 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SLC1A1P43005 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SLC1A1P43005 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms