Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HADHAP40939 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.02■□□□□ 0.16
HADHAP40939 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.02■□□□□ 0.16
HADHAP40939 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.02■□□□□ 0.16
HADHAP40939 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HADHAP40939 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.02■□□□□ 0.16
HADHAP40939 AC069262.1-201ENST00000539058 672 ntBASIC16.02■□□□□ 0.16
HADHAP40939 AC025678.2-201ENST00000562061 970 ntBASIC16.02■□□□□ 0.16
HADHAP40939 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.02■□□□□ 0.16
HADHAP40939 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.02■□□□□ 0.16
HADHAP40939 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HADHAP40939 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.02■□□□□ 0.16
HADHAP40939 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.02■□□□□ 0.15
HADHAP40939 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HADHAP40939 AC136621.1-201ENST00000624017 2304 ntBASIC16.02■□□□□ 0.15
HADHAP40939 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HADHAP40939 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HADHAP40939 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HADHAP40939 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HADHAP40939 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HADHAP40939 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.02■□□□□ 0.15
HADHAP40939 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HADHAP40939 KRT8P37-201ENST00000451609 1420 ntBASIC16.02■□□□□ 0.15
HADHAP40939 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HADHAP40939 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HADHAP40939 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.02■□□□□ 0.15
HADHAP40939 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HADHAP40939 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HADHAP40939 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HADHAP40939 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.01■□□□□ 0.15
HADHAP40939 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 EEF1DP4-201ENST00000446006 880 ntBASIC16.01■□□□□ 0.15
HADHAP40939 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.01■□□□□ 0.15
HADHAP40939 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.01■□□□□ 0.15
HADHAP40939 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 MIR4453-201ENST00000584019 89 ntBASIC16.01■□□□□ 0.15
HADHAP40939 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.01■□□□□ 0.15
HADHAP40939 RN7SL828P-201ENST00000607615 303 ntBASIC16.01■□□□□ 0.15
HADHAP40939 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 AC006486.2-201ENST00000624246 2199 ntBASIC16.01■□□□□ 0.15
HADHAP40939 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.01■□□□□ 0.15
HADHAP40939 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HADHAP40939 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HADHAP40939 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16■□□□□ 0.15
HADHAP40939 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16■□□□□ 0.15
HADHAP40939 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 REXO1L1P-202ENST00000608646 1974 ntBASIC16■□□□□ 0.15
HADHAP40939 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16■□□□□ 0.15
HADHAP40939 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 AC105250.1-201ENST00000509378 2057 ntBASIC16■□□□□ 0.15
HADHAP40939 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 GRAMD4P3-201ENST00000621665 1669 ntBASIC16■□□□□ 0.15
HADHAP40939 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HADHAP40939 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HADHAP40939 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16■□□□□ 0.15
HADHAP40939 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms