Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USP8P40818 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
USP8P40818 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
USP8P40818 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
USP8P40818 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.31■□□□□ 0.36
USP8P40818 KRT8P23-201ENST00000560090 1207 ntBASIC17.31■□□□□ 0.36
USP8P40818 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.31■□□□□ 0.36
USP8P40818 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.31■□□□□ 0.36
USP8P40818 AC061975.2-201ENST00000581722 295 ntBASIC17.31■□□□□ 0.36
USP8P40818 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
USP8P40818 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.31■□□□□ 0.36
USP8P40818 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.31■□□□□ 0.36
USP8P40818 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
USP8P40818 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.31■□□□□ 0.36
USP8P40818 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.31■□□□□ 0.36
USP8P40818 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP8P40818 AC138969.2-201ENST00000532739 9932 ntBASIC17.31■□□□□ 0.36
USP8P40818 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.3■□□□□ 0.36
USP8P40818 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.3■□□□□ 0.36
USP8P40818 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.3■□□□□ 0.36
USP8P40818 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.3■□□□□ 0.36
USP8P40818 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP8P40818 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 MIR346-201ENST00000362234 95 ntBASIC17.3■□□□□ 0.36
USP8P40818 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.3■□□□□ 0.36
USP8P40818 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.3■□□□□ 0.36
USP8P40818 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.3■□□□□ 0.36
USP8P40818 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.3■□□□□ 0.36
USP8P40818 AC022145.2-201ENST00000598203 171 ntBASIC17.3■□□□□ 0.36
USP8P40818 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
USP8P40818 AC105339.1-204ENST00000636249 355 ntBASIC17.3■□□□□ 0.36
USP8P40818 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP8P40818 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 PCDHA3-202ENST00000532566 4594 ntBASIC17.3■□□□□ 0.36
USP8P40818 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.3■□□□□ 0.36
USP8P40818 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP8P40818 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.3■□□□□ 0.36
USP8P40818 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP8P40818 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.3■□□□□ 0.36
USP8P40818 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.29■□□□□ 0.36
USP8P40818 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.29■□□□□ 0.36
USP8P40818 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.29■□□□□ 0.36
USP8P40818 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 HLA-H-201ENST00000383620 1096 ntBASIC17.29■□□□□ 0.36
USP8P40818 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.29■□□□□ 0.36
USP8P40818 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.29■□□□□ 0.36
USP8P40818 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
USP8P40818 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.29■□□□□ 0.36
USP8P40818 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.29■□□□□ 0.36
USP8P40818 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.29■□□□□ 0.36
USP8P40818 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.29■□□□□ 0.36
USP8P40818 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
USP8P40818 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
USP8P40818 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
USP8P40818 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP8P40818 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.29■□□□□ 0.36
USP8P40818 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
USP8P40818 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
USP8P40818 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.29■□□□□ 0.36
USP8P40818 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms