Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
VARSP26640 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.62■□□□□ 0.09
VARSP26640 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.62■□□□□ 0.09
VARSP26640 AC005237.2-201ENST00000434368 219 ntBASIC15.62■□□□□ 0.09
VARSP26640 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.62■□□□□ 0.09
VARSP26640 INGX-202ENST00000489074 768 ntBASIC15.62■□□□□ 0.09
VARSP26640 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.62■□□□□ 0.09
VARSP26640 RNA5SP410-201ENST00000516285 106 ntBASIC15.62■□□□□ 0.09
VARSP26640 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.62■□□□□ 0.09
VARSP26640 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.62■□□□□ 0.09
VARSP26640 AC061975.2-201ENST00000581722 295 ntBASIC15.62■□□□□ 0.09
VARSP26640 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
VARSP26640 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.62■□□□□ 0.09
VARSP26640 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VARSP26640 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.62■□□□□ 0.09
VARSP26640 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VARSP26640 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.62■□□□□ 0.09
VARSP26640 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VARSP26640 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
VARSP26640 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.61■□□□□ 0.09
VARSP26640 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.61■□□□□ 0.09
VARSP26640 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.61■□□□□ 0.09
VARSP26640 Z92544.3-201ENST00000624747 417 ntBASIC15.61■□□□□ 0.09
VARSP26640 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VARSP26640 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.61■□□□□ 0.09
VARSP26640 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.61■□□□□ 0.09
VARSP26640 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.61■□□□□ 0.09
VARSP26640 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VARSP26640 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 AC006058.4-201ENST00000624016 1670 ntBASIC15.6■□□□□ 0.09
VARSP26640 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.6■□□□□ 0.09
VARSP26640 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.6■□□□□ 0.09
VARSP26640 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
VARSP26640 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.6■□□□□ 0.09
VARSP26640 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC15.6■□□□□ 0.09
VARSP26640 FAM58DP-201ENST00000428076 619 ntBASIC15.6■□□□□ 0.09
VARSP26640 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.6■□□□□ 0.09
VARSP26640 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.6■□□□□ 0.09
VARSP26640 AC069262.1-201ENST00000539058 672 ntBASIC15.6■□□□□ 0.09
VARSP26640 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 AC093520.2-201ENST00000561830 333 ntBASIC15.6■□□□□ 0.09
VARSP26640 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.6■□□□□ 0.09
VARSP26640 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.6■□□□□ 0.09
VARSP26640 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms