Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.145e-11■□□□□ 11.3
RPS3P23396 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.365e-11■□□□□ 11.3
RPS3P23396 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.65e-11■□□□□ 11.3
RPS3P23396 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.875e-11■□□□□ 11.3
RPS3P23396 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.231e-7■□□□□ 11.3
RPS3P23396 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.721e-7■□□□□ 11.3
RPS3P23396 AKIRIN1-204ENST00000531822 718 ntTSL 58.1□□□□□ -1.112e-7■□□□□ 11.3
RPS3P23396 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.172e-6■□□□□ 11.2
RPS3P23396 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-6■□□□□ 11.2
RPS3P23396 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.62e-6■□□□□ 11.2
RPS3P23396 SLC44A1-205ENST00000470972 10433 ntTSL 1 (best)11.14□□□□□ -0.632e-6■□□□□ 11.2
RPS3P23396 NECAP2-210ENST00000508680 470 ntTSL 313.66□□□□□ -0.224e-6■□□□□ 11.2
RPS3P23396 AGFG2-203ENST00000430857 915 ntTSL 524.94■■□□□ 1.583e-15■□□□□ 11.2
RPS3P23396 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)19.94■□□□□ 0.783e-15■□□□□ 11.2
RPS3P23396 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.533e-15■□□□□ 11.2
RPS3P23396 AGFG2-204ENST00000474713 1864 ntTSL 517.47■□□□□ 0.393e-15■□□□□ 11.2
RPS3P23396 SFT2D1-202ENST00000478705 659 ntTSL 215.78■□□□□ 0.124e-17■□□□□ 11.2
RPS3P23396 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.014e-17■□□□□ 11.2
RPS3P23396 SFT2D1-204ENST00000487841 2576 ntTSL 1 (best)12.53□□□□□ -0.44e-17■□□□□ 11.2
RPS3P23396 CCT3-213ENST00000489870 827 ntTSL 29.2□□□□□ -0.942e-6■□□□□ 11.2
RPS3P23396 RPL6-212ENST00000553205 899 ntTSL 22.76□□□□□ -1.975e-10■□□□□ 11.2
RPS3P23396 HNRNPM-213ENST00000600092 1086 ntTSL 218.01■□□□□ 0.471e-16■□□□□ 11.2
RPS3P23396 LAMB1-211ENST00000476039 653 ntTSL 212.33□□□□□ -0.445e-9■□□□□ 11.2
RPS3P23396 SLC39A7-203ENST00000444757 1015 ntTSL 510.97□□□□□ -0.659e-8■□□□□ 11.2
RPS3P23396 YDJC-205ENST00000468686 1423 ntTSL 1 (best)20.7■□□□□ 0.92e-6■□□□□ 11.2
RPS3P23396 YDJC-207ENST00000482998 1388 ntTSL 519.34■□□□□ 0.692e-6■□□□□ 11.2
RPS3P23396 YDJC-204ENST00000464015 1613 ntTSL 1 (best)18.85■□□□□ 0.612e-6■□□□□ 11.2
RPS3P23396 YDJC-206ENST00000473985 1494 ntTSL 518.56■□□□□ 0.562e-6■□□□□ 11.2
RPS3P23396 YDJC-203ENST00000415762 1410 ntTSL 1 (best)17.86■□□□□ 0.452e-6■□□□□ 11.2
RPS3P23396 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.322e-6■□□□□ 11.2
RPS3P23396 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.94■□□□□ 0.32e-6■□□□□ 11.2
RPS3P23396 MPG-202ENST00000356432 1205 ntAPPRIS ALT2 TSL 1 (best)18.93■□□□□ 0.623e-10■□□□□ 11.2
RPS3P23396 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.35■□□□□ 0.533e-10■□□□□ 11.2
RPS3P23396 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.273e-10■□□□□ 11.2
RPS3P23396 MPG-204ENST00000436333 884 ntTSL 216.67■□□□□ 0.263e-10■□□□□ 11.2
RPS3P23396 CNP-207ENST00000587679 581 ntTSL 422.75■■□□□ 1.232e-9■□□□□ 11.2
RPS3P23396 LAMA5-212ENST00000495695 780 ntTSL 218.85■□□□□ 0.619e-7■□□□□ 11.2
RPS3P23396 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.87□□□□□ -1.632e-7■□□□□ 11.2
RPS3P23396 CD81-206ENST00000481386 898 ntTSL 217.6■□□□□ 0.416e-8■□□□□ 11.2
RPS3P23396 RBBP7-205ENST00000416035 857 ntTSL 37.3□□□□□ -1.241e-6■□□□□ 11.2
RPS3P23396 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.16■□□□□ 0.181e-6■□□□□ 11.2
RPS3P23396 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.291e-6■□□□□ 11.2
RPS3P23396 CYB5A-207ENST00000583418 5913 ntTSL 28.81□□□□□ -11e-6■□□□□ 11.2
RPS3P23396 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.16□□□□□ -1.261e-6■□□□□ 11.2
RPS3P23396 ERP29-205ENST00000553161 916 ntTSL 1 (best)11.2□□□□□ -0.626e-24■□□□□ 11.2
RPS3P23396 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.021e-7■□□□□ 11.2
RPS3P23396 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.15□□□□□ -0.141e-7■□□□□ 11.2
RPS3P23396 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.93□□□□□ -0.181e-7■□□□□ 11.2
RPS3P23396 MED15-211ENST00000433831 3267 ntTSL 513.73□□□□□ -0.211e-7■□□□□ 11.2
RPS3P23396 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.361e-7■□□□□ 11.2
RPS3P23396 MED15-230ENST00000492381 3619 ntTSL 210.24□□□□□ -0.771e-7■□□□□ 11.2
RPS3P23396 CLSTN3-214ENST00000542663 390 ntTSL 216.85■□□□□ 0.293e-12■□□□□ 11.2
RPS3P23396 ENTPD6-218ENST00000490187 1918 ntTSL 215.42■□□□□ 0.063e-12■□□□□ 11.2
RPS3P23396 ENTPD6-217ENST00000485936 2588 ntTSL 214.7□□□□□ -0.063e-12■□□□□ 11.2
RPS3P23396 ENTPD6-214ENST00000463734 639 ntTSL 212.46□□□□□ -0.413e-12■□□□□ 11.2
RPS3P23396 SQLE-204ENST00000520493 737 ntTSL 31.87□□□□□ -2.114e-13■□□□□ 11.2
RPS3P23396 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.791e-10■□□□□ 11.2
RPS3P23396 TMED10-206ENST00000557670 917 ntTSL 29.47□□□□□ -0.894e-15■□□□□ 11.2
RPS3P23396 TMED10-202ENST00000555036 888 ntTSL 1 (best)5.79□□□□□ -1.484e-15■□□□□ 11.2
RPS3P23396 TMED10-205ENST00000556969 1314 ntTSL 25.74□□□□□ -1.494e-15■□□□□ 11.2
RPS3P23396 IST1-222ENST00000545388 630 ntTSL 210.6□□□□□ -0.713e-8■□□□□ 11.2
RPS3P23396 IST1-211ENST00000537613 894 ntTSL 210.14□□□□□ -0.793e-8■□□□□ 11.2
RPS3P23396 IST1-207ENST00000534994 674 ntTSL 59.99□□□□□ -0.813e-8■□□□□ 11.2
RPS3P23396 IST1-214ENST00000538709 491 ntTSL 29.93□□□□□ -0.823e-8■□□□□ 11.2
RPS3P23396 IST1-220ENST00000541918 908 ntTSL 58.43□□□□□ -1.063e-8■□□□□ 11.2
RPS3P23396 IST1-210ENST00000537571 603 ntTSL 25.41□□□□□ -1.543e-8■□□□□ 11.2
RPS3P23396 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.28□□□□□ -2.363e-8■□□□□ 11.2
RPS3P23396 SLC9A3R1-203ENST00000578958 714 ntTSL 216.85■□□□□ 0.293e-9■□□□□ 11.2
RPS3P23396 THBS1-208ENST00000560894 537 ntTSL 23.12□□□□□ -1.912e-6■□□□□ 11.2
RPS3P23396 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.379e-7■□□□□ 11.2
RPS3P23396 SCAMP4-204ENST00000414057 1477 ntTSL 1 (best)16.51■□□□□ 0.239e-7■□□□□ 11.2
RPS3P23396 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.229e-7■□□□□ 11.2
RPS3P23396 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.93□□□□□ -0.029e-7■□□□□ 11.2
RPS3P23396 RPL38-207ENST00000534490 429 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.792e-19■□□□□ 11.2
RPS3P23396 DAG1-204ENST00000421560 579 ntTSL 415.56■□□□□ 0.084e-7■□□□□ 11.2
RPS3P23396 DAG1-207ENST00000431960 549 ntTSL 412.23□□□□□ -0.454e-7■□□□□ 11.2
RPS3P23396 MYH9-206ENST00000472210 387 ntTSL 312.57□□□□□ -0.48e-7■□□□□ 11.2
RPS3P23396 MYH9-205ENST00000463027 562 ntTSL 311.79□□□□□ -0.524e-7■□□□□ 11.2
RPS3P23396 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.142e-6■□□□□ 11.2
RPS3P23396 EIF3H-208ENST00000520813 562 ntTSL 415.85■□□□□ 0.135e-7■□□□□ 11.2
RPS3P23396 EIF3H-203ENST00000518034 1047 ntTSL 210.37□□□□□ -0.755e-7■□□□□ 11.2
RPS3P23396 EIF3H-206ENST00000519046 488 ntTSL 37.93□□□□□ -1.145e-7■□□□□ 11.2
RPS3P23396 EIF3H-210ENST00000522453 518 ntTSL 37.38□□□□□ -1.235e-7■□□□□ 11.2
RPS3P23396 EIF3H-202ENST00000517974 594 ntTSL 23.21□□□□□ -1.95e-7■□□□□ 11.2
RPS3P23396 TXN-203ENST00000487892 540 ntTSL 20.95□□□□□ -2.262e-12■□□□□ 11.2
RPS3P23396 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.162e-11■□□□□ 11.2
RPS3P23396 CD99-201ENST00000381177 756 ntTSL 29.67□□□□□ -0.866e-17■□□□□ 11.2
RPS3P23396 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.392e-7■□□□□ 11.2
RPS3P23396 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.42e-7■□□□□ 11.2
RPS3P23396 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.452e-7■□□□□ 11.2
RPS3P23396 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.692e-7■□□□□ 11.2
RPS3P23396 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.882e-7■□□□□ 11.2
RPS3P23396 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.01□□□□□ -1.292e-7■□□□□ 11.2
RPS3P23396 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.552e-7■□□□□ 11.2
RPS3P23396 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.562e-7■□□□□ 11.2
RPS3P23396 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.19□□□□□ -1.582e-7■□□□□ 11.2
RPS3P23396 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.56□□□□□ -1.682e-7■□□□□ 11.2
RPS3P23396 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.742e-7■□□□□ 11.2
RPS3P23396 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.82□□□□□ -1.82e-7■□□□□ 11.2
RPS3P23396 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.671e-8■□□□□ 11.2
Retrieved 100 of 24,271 protein–RNA pairs in 450.6 ms