Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCP1P13796 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCP1P13796 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LCP1P13796 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LCP1P13796 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.63■□□□□ 0.25
LCP1P13796 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LCP1P13796 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.62■□□□□ 0.25
LCP1P13796 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.62■□□□□ 0.25
LCP1P13796 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.62■□□□□ 0.25
LCP1P13796 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.62■□□□□ 0.25
LCP1P13796 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.62■□□□□ 0.25
LCP1P13796 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 MIR661-201ENST00000384842 89 ntBASIC16.62■□□□□ 0.25
LCP1P13796 AC236430.1-201ENST00000402231 743 ntBASIC16.62■□□□□ 0.25
LCP1P13796 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LCP1P13796 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.62■□□□□ 0.25
LCP1P13796 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
LCP1P13796 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 AL589987.1-201ENST00000453380 819 ntBASIC16.62■□□□□ 0.25
LCP1P13796 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 SERBP1P5-201ENST00000510079 1181 ntBASIC16.62■□□□□ 0.25
LCP1P13796 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
LCP1P13796 TIMM17BP1-201ENST00000545713 516 ntBASIC16.62■□□□□ 0.25
LCP1P13796 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
LCP1P13796 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.62■□□□□ 0.25
LCP1P13796 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.62■□□□□ 0.25
LCP1P13796 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.62■□□□□ 0.25
LCP1P13796 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.62■□□□□ 0.25
LCP1P13796 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.62■□□□□ 0.25
LCP1P13796 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.62■□□□□ 0.25
LCP1P13796 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.62■□□□□ 0.25
LCP1P13796 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LCP1P13796 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.62■□□□□ 0.25
LCP1P13796 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LCP1P13796 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LCP1P13796 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.61■□□□□ 0.25
LCP1P13796 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.61■□□□□ 0.25
LCP1P13796 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
LCP1P13796 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.61■□□□□ 0.25
LCP1P13796 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LCP1P13796 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.61■□□□□ 0.25
LCP1P13796 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.61■□□□□ 0.25
LCP1P13796 GNAQP1-201ENST00000444815 1067 ntBASIC16.61■□□□□ 0.25
LCP1P13796 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.61■□□□□ 0.25
LCP1P13796 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LCP1P13796 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LCP1P13796 AC004790.1-201ENST00000612686 536 ntBASIC16.61■□□□□ 0.25
LCP1P13796 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
LCP1P13796 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LCP1P13796 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.61■□□□□ 0.25
LCP1P13796 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LCP1P13796 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.61■□□□□ 0.25
LCP1P13796 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms