Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AJ011931.1-201ENST00000618749 2492 ntBASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.37■□□□□ 0.05
LINGO3P0C6S8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AL353732.1-201ENST00000569618 1459 ntBASIC15.37■□□□□ 0.05
LINGO3P0C6S8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINGO3P0C6S8 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.36■□□□□ 0.05
LINGO3P0C6S8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CRYGEP-201ENST00000412192 528 ntBASIC15.36■□□□□ 0.05
LINGO3P0C6S8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 AC106730.1-201ENST00000566722 1090 ntBASIC15.36■□□□□ 0.05
LINGO3P0C6S8 AC005412.3-201ENST00000580309 715 ntBASIC15.36■□□□□ 0.05
LINGO3P0C6S8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 AP001350.2-201ENST00000625104 1094 ntBASIC15.36■□□□□ 0.05
LINGO3P0C6S8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 FGD5P1-202ENST00000614866 2498 ntBASIC15.36■□□□□ 0.05
LINGO3P0C6S8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.36■□□□□ 0.05
LINGO3P0C6S8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINGO3P0C6S8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms