Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 LINC00552-201ENST00000625151 2579 ntBASIC13.75□□□□□ -0.21
CSF1P09603 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CSF1P09603 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.75□□□□□ -0.21
CSF1P09603 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.75□□□□□ -0.21
CSF1P09603 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
CSF1P09603 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 AC005593.1-201ENST00000624894 515 ntBASIC13.75□□□□□ -0.21
CSF1P09603 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.75□□□□□ -0.21
CSF1P09603 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CSF1P09603 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.75□□□□□ -0.21
CSF1P09603 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CSF1P09603 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.75□□□□□ -0.21
CSF1P09603 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 AP002414.3-201ENST00000589352 1468 ntBASIC13.74□□□□□ -0.21
CSF1P09603 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
CSF1P09603 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.74□□□□□ -0.21
CSF1P09603 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.74□□□□□ -0.21
CSF1P09603 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 AC245100.5-201ENST00000452108 331 ntBASIC13.74□□□□□ -0.21
CSF1P09603 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.74□□□□□ -0.21
CSF1P09603 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.74□□□□□ -0.21
CSF1P09603 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 AL355385.1-201ENST00000606123 409 ntBASIC13.74□□□□□ -0.21
CSF1P09603 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.74□□□□□ -0.21
CSF1P09603 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.74□□□□□ -0.21
CSF1P09603 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSF1P09603 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.74□□□□□ -0.21
CSF1P09603 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSF1P09603 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.73□□□□□ -0.21
CSF1P09603 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CSF1P09603 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.73□□□□□ -0.21
CSF1P09603 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.73□□□□□ -0.21
CSF1P09603 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSF1P09603 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSF1P09603 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSF1P09603 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSF1P09603 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms