Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
THBS1P07996 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.56□□□□□ -0.08
THBS1P07996 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
THBS1P07996 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 RN7SL828P-201ENST00000607615 303 ntBASIC14.56□□□□□ -0.08
THBS1P07996 AP001002.2-201ENST00000625137 386 ntBASIC14.56□□□□□ -0.08
THBS1P07996 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 KRT8P44-201ENST00000441609 1350 ntBASIC14.56□□□□□ -0.08
THBS1P07996 KRT8P12-202ENST00000472924 1397 ntBASIC14.56□□□□□ -0.08
THBS1P07996 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
THBS1P07996 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
THBS1P07996 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS1P07996 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS1P07996 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
THBS1P07996 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
THBS1P07996 AL139400.1-201ENST00000366220 510 ntBASIC14.55□□□□□ -0.08
THBS1P07996 SPDYE7P-202ENST00000420373 878 ntBASIC14.55□□□□□ -0.08
THBS1P07996 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS1P07996 HIST3H2BA-201ENST00000436555 524 ntBASIC14.55□□□□□ -0.08
THBS1P07996 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS1P07996 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS1P07996 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.55□□□□□ -0.08
THBS1P07996 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 MIR3197-201ENST00000582241 73 ntBASIC14.55□□□□□ -0.08
THBS1P07996 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 AP001059.3-201ENST00000619053 235 ntBASIC14.55□□□□□ -0.08
THBS1P07996 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS1P07996 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.55□□□□□ -0.08
THBS1P07996 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS1P07996 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
THBS1P07996 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS1P07996 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
THBS1P07996 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
THBS1P07996 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS1P07996 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.54□□□□□ -0.08
THBS1P07996 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms