Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 RN7SL828P-201ENST00000607615 303 ntBASIC12.75□□□□□ -0.37
HLA-DRB1P01911 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DRB1P01911 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 AC126177.1-201ENST00000547829 2218 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 AC134407.2-201ENST00000625089 1978 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 AC112504.1-201ENST00000623415 1841 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 AL136982.4-201ENST00000437689 1740 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 TUBB3P1-201ENST00000405796 1332 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 FAM86GP-201ENST00000448322 971 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 AC093028.1-201ENST00000622998 982 ntBASIC12.74□□□□□ -0.37
HLA-DRB1P01911 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DRB1P01911 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 SPDYE17-201ENST00000412399 783 ntBASIC12.73□□□□□ -0.37
HLA-DRB1P01911 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 MTND6P24-201ENST00000440466 518 ntBASIC12.73□□□□□ -0.37
HLA-DRB1P01911 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DRB1P01911 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms