Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 FLJ16779-201ENST00000612722 7638 ntBASIC16.22■□□□□ 0.19
MT-CO1P00395 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-CO1P00395 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-CO1P00395 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-CO1P00395 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MT-CO1P00395 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MT-CO1P00395 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MT-CO1P00395 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MT-CO1P00395 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 AP003680.1-201ENST00000598970 3660 ntBASIC16.21■□□□□ 0.19
MT-CO1P00395 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
MT-CO1P00395 PRAL-201ENST00000624952 3286 ntBASIC16.21■□□□□ 0.19
MT-CO1P00395 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MT-CO1P00395 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MT-CO1P00395 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 COX20P2-201ENST00000452636 358 ntBASIC16.21■□□□□ 0.19
MT-CO1P00395 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.21■□□□□ 0.19
MT-CO1P00395 AC004233.3-201ENST00000607794 1269 ntBASIC16.21■□□□□ 0.19
MT-CO1P00395 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.21■□□□□ 0.19
MT-CO1P00395 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.21■□□□□ 0.19
MT-CO1P00395 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MT-CO1P00395 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-CO1P00395 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MT-CO1P00395 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.21■□□□□ 0.18
MT-CO1P00395 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-CO1P00395 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MT-CO1P00395 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
MT-CO1P00395 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MT-CO1P00395 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-CO1P00395 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.2■□□□□ 0.18
MT-CO1P00395 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-CO1P00395 AC069224.1-201ENST00000566372 1715 ntBASIC16.2■□□□□ 0.18
MT-CO1P00395 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MT-CO1P00395 SPDYE19P-201ENST00000338590 713 ntBASIC16.2■□□□□ 0.18
MT-CO1P00395 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 PHKG1P2-201ENST00000457537 863 ntBASIC16.2■□□□□ 0.18
MT-CO1P00395 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-CO1P00395 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.2■□□□□ 0.18
MT-CO1P00395 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.2■□□□□ 0.18
MT-CO1P00395 SRD5A3P1-201ENST00000603021 949 ntBASIC16.2■□□□□ 0.18
MT-CO1P00395 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
MT-CO1P00395 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.2■□□□□ 0.18
MT-CO1P00395 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-CO1P00395 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MT-CO1P00395 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
MT-CO1P00395 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
MT-CO1P00395 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-CO1P00395 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
MT-CO1P00395 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.19■□□□□ 0.18
MT-CO1P00395 Z97205.2-201ENST00000564697 1639 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 CDC14C-201ENST00000428251 1719 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 AC007541.1-201ENST00000570282 1469 ntBASIC16.19■□□□□ 0.18
MT-CO1P00395 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MT-CO1P00395 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-CO1P00395 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms