Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 MIR718-201ENST00000390190 70 ntBASIC13.28□□□□□ -0.28
SIX6O95475 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 AC246785.2-201ENST00000432512 513 ntBASIC13.28□□□□□ -0.28
SIX6O95475 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.28□□□□□ -0.28
SIX6O95475 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 AC010203.1-204ENST00000548782 407 ntBASIC13.28□□□□□ -0.28
SIX6O95475 AL160237.2-201ENST00000556165 472 ntBASIC13.28□□□□□ -0.28
SIX6O95475 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.28□□□□□ -0.28
SIX6O95475 AP005901.3-202ENST00000581653 237 ntBASIC13.28□□□□□ -0.28
SIX6O95475 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 AP001350.2-201ENST00000625104 1094 ntBASIC13.28□□□□□ -0.28
SIX6O95475 MBLAC2-202ENST00000514906 1936 ntBASIC13.28□□□□□ -0.28
SIX6O95475 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 REXO1L1P-202ENST00000608646 1974 ntBASIC13.28□□□□□ -0.28
SIX6O95475 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SIX6O95475 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 AL353732.1-201ENST00000569618 1459 ntBASIC13.28□□□□□ -0.28
SIX6O95475 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.28□□□□□ -0.28
SIX6O95475 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.28□□□□□ -0.28
SIX6O95475 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SIX6O95475 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.27□□□□□ -0.28
SIX6O95475 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SIX6O95475 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.27□□□□□ -0.28
SIX6O95475 CR383656.2-201ENST00000548656 2254 ntBASIC13.27□□□□□ -0.28
SIX6O95475 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.27□□□□□ -0.28
SIX6O95475 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 LIN28AP1-201ENST00000429574 405 ntBASIC13.27□□□□□ -0.29
SIX6O95475 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.27□□□□□ -0.29
SIX6O95475 ATP5G1P1-201ENST00000448724 379 ntBASIC13.27□□□□□ -0.29
SIX6O95475 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 AC008550.1-201ENST00000511500 884 ntBASIC13.27□□□□□ -0.29
SIX6O95475 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.27□□□□□ -0.29
SIX6O95475 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.27□□□□□ -0.29
SIX6O95475 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.27□□□□□ -0.29
SIX6O95475 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 AC064862.7-201ENST00000604520 867 ntBASIC13.27□□□□□ -0.29
SIX6O95475 LINC01023-201ENST00000606054 436 ntBASIC13.27□□□□□ -0.29
SIX6O95475 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.27□□□□□ -0.29
SIX6O95475 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.27□□□□□ -0.29
SIX6O95475 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.27□□□□□ -0.29
SIX6O95475 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SIX6O95475 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SIX6O95475 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SIX6O95475 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SIX6O95475 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SIX6O95475 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms