Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH4O75427 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRCH4O75427 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 KRT8P44-201ENST00000441609 1350 ntBASIC16.41■□□□□ 0.22
LRCH4O75427 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH4O75427 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRCH4O75427 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.41■□□□□ 0.22
LRCH4O75427 AC107890.1-201ENST00000422478 521 ntBASIC16.41■□□□□ 0.22
LRCH4O75427 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.41■□□□□ 0.22
LRCH4O75427 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH4O75427 AC069120.2-201ENST00000524091 540 ntBASIC16.41■□□□□ 0.22
LRCH4O75427 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH4O75427 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.41■□□□□ 0.22
LRCH4O75427 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH4O75427 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCH4O75427 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCH4O75427 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCH4O75427 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRCH4O75427 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 TSPY26P-202ENST00000565928 3884 ntBASIC16.4■□□□□ 0.22
LRCH4O75427 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC092580.3-201ENST00000430932 139 ntBASIC16.4■□□□□ 0.22
LRCH4O75427 KRT18P64-201ENST00000434946 1219 ntBASIC16.4■□□□□ 0.22
LRCH4O75427 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.4■□□□□ 0.22
LRCH4O75427 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.4■□□□□ 0.22
LRCH4O75427 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 AC091951.1-201ENST00000512854 2465 ntBASIC16.4■□□□□ 0.22
LRCH4O75427 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCH4O75427 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCH4O75427 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCH4O75427 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRCH4O75427 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.39■□□□□ 0.22
LRCH4O75427 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LRCH4O75427 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LRCH4O75427 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCH4O75427 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
LRCH4O75427 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCH4O75427 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms