Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SORBS3O60504 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SORBS3O60504 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.75■□□□□ 0.43
SORBS3O60504 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.75■□□□□ 0.43
SORBS3O60504 AC007389.4-201ENST00000454674 793 ntBASIC17.75■□□□□ 0.43
SORBS3O60504 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.75■□□□□ 0.43
SORBS3O60504 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.75■□□□□ 0.43
SORBS3O60504 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.75■□□□□ 0.43
SORBS3O60504 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.75■□□□□ 0.43
SORBS3O60504 MIR4259-201ENST00000584466 101 ntBASIC17.75■□□□□ 0.43
SORBS3O60504 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.75■□□□□ 0.43
SORBS3O60504 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
SORBS3O60504 CU634019.7-201ENST00000624153 1185 ntBASIC17.75■□□□□ 0.43
SORBS3O60504 FP236241.2-201ENST00000624906 1185 ntBASIC17.75■□□□□ 0.43
SORBS3O60504 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.75■□□□□ 0.43
SORBS3O60504 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 AL139384.1-201ENST00000612143 3047 ntBASIC17.75■□□□□ 0.43
SORBS3O60504 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SORBS3O60504 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SORBS3O60504 AC006449.5-201ENST00000610658 2098 ntBASIC17.75■□□□□ 0.43
SORBS3O60504 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.74■□□□□ 0.43
SORBS3O60504 VDAC1P7-201ENST00000462417 847 ntBASIC17.74■□□□□ 0.43
SORBS3O60504 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SORBS3O60504 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
SORBS3O60504 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.74■□□□□ 0.43
SORBS3O60504 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.73■□□□□ 0.43
SORBS3O60504 PRAL-201ENST00000624952 3286 ntBASIC17.73■□□□□ 0.43
SORBS3O60504 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SORBS3O60504 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.73■□□□□ 0.43
SORBS3O60504 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.73■□□□□ 0.43
SORBS3O60504 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SORBS3O60504 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.73■□□□□ 0.43
SORBS3O60504 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SORBS3O60504 AC133539.2-201ENST00000604757 467 ntBASIC17.73■□□□□ 0.43
SORBS3O60504 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.73■□□□□ 0.43
SORBS3O60504 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SORBS3O60504 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
SORBS3O60504 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SORBS3O60504 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SORBS3O60504 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.73■□□□□ 0.43
SORBS3O60504 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.73■□□□□ 0.43
SORBS3O60504 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SORBS3O60504 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SORBS3O60504 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms