Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC132872.4-202ENST00000622924 2756 ntBASIC17.08■□□□□ 0.33
EXTL3O43909 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EXTL3O43909 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.08■□□□□ 0.33
EXTL3O43909 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EXTL3O43909 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.08■□□□□ 0.33
EXTL3O43909 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EXTL3O43909 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.08■□□□□ 0.33
EXTL3O43909 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.08■□□□□ 0.32
EXTL3O43909 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EXTL3O43909 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.08■□□□□ 0.32
EXTL3O43909 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.08■□□□□ 0.32
EXTL3O43909 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.08■□□□□ 0.32
EXTL3O43909 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 AL391069.4-201ENST00000609583 481 ntBASIC17.08■□□□□ 0.32
EXTL3O43909 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EXTL3O43909 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.32
EXTL3O43909 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EXTL3O43909 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.08■□□□□ 0.32
EXTL3O43909 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.08■□□□□ 0.32
EXTL3O43909 AC090616.6-203ENST00000579186 1945 ntBASIC17.08■□□□□ 0.32
EXTL3O43909 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 AC009090.5-201ENST00000624886 2285 ntBASIC17.07■□□□□ 0.32
EXTL3O43909 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 AL133267.1-201ENST00000398220 340 ntBASIC17.07■□□□□ 0.32
EXTL3O43909 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 GAPDHP21-201ENST00000450301 1010 ntBASIC17.07■□□□□ 0.32
EXTL3O43909 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.07■□□□□ 0.32
EXTL3O43909 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.07■□□□□ 0.32
EXTL3O43909 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.07■□□□□ 0.32
EXTL3O43909 TPRX2P-201ENST00000535362 881 ntBASIC17.07■□□□□ 0.32
EXTL3O43909 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
EXTL3O43909 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.07■□□□□ 0.32
EXTL3O43909 AC015910.1-201ENST00000579400 975 ntBASIC17.07■□□□□ 0.32
EXTL3O43909 AL158212.4-201ENST00000624062 1286 ntBASIC17.07■□□□□ 0.32
EXTL3O43909 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.07■□□□□ 0.32
EXTL3O43909 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EXTL3O43909 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
EXTL3O43909 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EXTL3O43909 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EXTL3O43909 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.06■□□□□ 0.32
EXTL3O43909 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.06■□□□□ 0.32
EXTL3O43909 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EXTL3O43909 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.06■□□□□ 0.32
EXTL3O43909 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.06■□□□□ 0.32
EXTL3O43909 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.06■□□□□ 0.32
EXTL3O43909 KRT18P43-201ENST00000469825 1281 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 AP005018.1-201ENST00000525475 301 ntBASIC17.06■□□□□ 0.32
EXTL3O43909 AC023310.3-201ENST00000557027 670 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms