Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC28A2O43868 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC28A2O43868 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC28A2O43868 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
SLC28A2O43868 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC28A2O43868 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC28A2O43868 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC28A2O43868 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 U82695.1-201ENST00000635752 1889 ntBASIC15.29■□□□□ 0.04
SLC28A2O43868 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 WASH6P-202ENST00000359512 1437 ntBASIC15.29■□□□□ 0.04
SLC28A2O43868 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 MIR648-201ENST00000385046 94 ntBASIC15.29■□□□□ 0.04
SLC28A2O43868 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC28A2O43868 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 MIR3909-201ENST00000579518 119 ntBASIC15.29■□□□□ 0.04
SLC28A2O43868 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC28A2O43868 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 AC133552.6-201ENST00000613406 534 ntBASIC15.29■□□□□ 0.04
SLC28A2O43868 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SLC28A2O43868 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC28A2O43868 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC28A2O43868 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 PRAL-201ENST00000624952 3286 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC28A2O43868 AC092933.1-201ENST00000393644 945 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC28A2O43868 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC28A2O43868 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 KRT223P-202ENST00000449164 1292 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC28A2O43868 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC28A2O43868 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC28A2O43868 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC28A2O43868 MIR4538-201ENST00000581377 78 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 RN7SL219P-201ENST00000582872 296 ntBASIC15.28■□□□□ 0.04
SLC28A2O43868 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC28A2O43868 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC28A2O43868 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms