Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 TNRC18P2-201ENST00000417666 2714 ntBASIC15.51■□□□□ 0.07
CDC7O00311 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.51■□□□□ 0.07
CDC7O00311 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.51■□□□□ 0.07
CDC7O00311 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.51■□□□□ 0.07
CDC7O00311 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.51■□□□□ 0.07
CDC7O00311 AC023824.1-201ENST00000562945 2975 ntBASIC15.51■□□□□ 0.07
CDC7O00311 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CDC7O00311 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC7O00311 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.51■□□□□ 0.07
CDC7O00311 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDC7O00311 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDC7O00311 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC7O00311 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 AC091951.1-201ENST00000512854 2465 ntBASIC15.5■□□□□ 0.07
CDC7O00311 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CDC7O00311 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.5■□□□□ 0.07
CDC7O00311 AC004967.1-201ENST00000453589 447 ntBASIC15.5■□□□□ 0.07
CDC7O00311 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.5■□□□□ 0.07
CDC7O00311 SNHG9-202ENST00000564014 471 ntBASIC15.5■□□□□ 0.07
CDC7O00311 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CDC7O00311 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC7O00311 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC7O00311 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC7O00311 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC7O00311 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC7O00311 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC7O00311 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC7O00311 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 AL035456.1-201ENST00000456064 1369 ntBASIC15.49■□□□□ 0.07
CDC7O00311 KRT8P12-202ENST00000472924 1397 ntBASIC15.49■□□□□ 0.07
CDC7O00311 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDC7O00311 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDC7O00311 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 FO393414.2-201ENST00000405153 598 ntBASIC15.49■□□□□ 0.07
CDC7O00311 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC7O00311 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC7O00311 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC7O00311 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms