Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC010536.1-201ENST00000538868 2611 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 AC092117.1-201ENST00000621230 3250 ntBASIC8.11□□□□□ -1.11
LINC01558Q9Y6Z2 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 SUPT20HL1-201ENST00000436466 2618 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AL592424.1-201ENST00000563624 1536 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 LINC01238-205ENST00000567549 1107 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AL121829.2-201ENST00000620908 328 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AC006557.6-201ENST00000623071 864 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 DLX4-206ENST00000611342 1662 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AP000437.1-201ENST00000624057 2085 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 KRT8P22-201ENST00000562317 1415 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 AC023794.5-201ENST00000564380 2157 ntBASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LINC01558Q9Y6Z2 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms