Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 AC025048.3-201ENST00000590609 569 ntBASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 AC005702.4-201ENST00000618393 416 ntBASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
COL4A3BPQ9Y5P4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 GNAQP1-201ENST00000444815 1067 ntBASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AC004790.1-201ENST00000612686 536 ntBASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AC004461.2-201ENST00000629517 803 ntBASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COL4A3BPQ9Y5P4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AC092384.3-202ENST00000564646 2873 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AZGP1P1-201ENST00000411909 902 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SPDYE22P-201ENST00000582158 798 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AL132655.2-201ENST00000596276 594 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AF228730.6-201ENST00000641497 218 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AC084121.3-201ENST00000641716 218 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 AC105233.6-201ENST00000642093 218 ntBASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms