Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.4■□□□□ 0.22
DNMT3BQ9UBC3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
DNMT3BQ9UBC3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
DNMT3BQ9UBC3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 PKD1P1-201ENST00000458669 6805 ntBASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 MIR6787-201ENST00000616675 61 ntBASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 PCDHA1-201ENST00000378133 2726 ntBASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNMT3BQ9UBC3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AL596087.1-201ENST00000400979 1969 ntBASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 ACKR1-201ENST00000368121 1240 ntBASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 MIR648-201ENST00000385046 94 ntBASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC026954.1-201ENST00000429771 1293 ntBASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC022137.2-201ENST00000503482 481 ntBASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 GNRHR2-203ENST00000581100 1187 ntBASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DNMT3BQ9UBC3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DNMT3BQ9UBC3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms