Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRC40Q9H9A6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AC004967.1-201ENST00000453589 447 ntBASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 SNHG9-202ENST00000564014 471 ntBASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 MIR4453-201ENST00000584019 89 ntBASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AL133215.2-201ENST00000609242 977 ntBASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 AC134684.3-201ENST00000641758 218 ntBASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC40Q9H9A6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 MTND6P24-201ENST00000440466 518 ntBASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 AL512356.2-201ENST00000546955 174 ntBASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC40Q9H9A6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms