Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 AC004461.2-201ENST00000629517 803 ntBASIC16.36■□□□□ 0.21
HAPLN3Q96S86 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
HAPLN3Q96S86 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 BCRP1-201ENST00000444246 691 ntBASIC16.35■□□□□ 0.21
HAPLN3Q96S86 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 AC135586.1-201ENST00000539323 574 ntBASIC16.35■□□□□ 0.21
HAPLN3Q96S86 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 AC092337.1-201ENST00000568699 1129 ntBASIC16.35■□□□□ 0.21
HAPLN3Q96S86 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 LINC02084-201ENST00000606069 1096 ntBASIC16.35■□□□□ 0.21
HAPLN3Q96S86 AC004840.1-201ENST00000636359 365 ntBASIC16.35■□□□□ 0.21
HAPLN3Q96S86 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.35■□□□□ 0.21
HAPLN3Q96S86 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HAPLN3Q96S86 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 FAM8A3P-201ENST00000427218 844 ntBASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 SLED1-202ENST00000512051 380 ntBASIC16.34■□□□□ 0.21
HAPLN3Q96S86 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.34■□□□□ 0.21
HAPLN3Q96S86 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.34■□□□□ 0.21
HAPLN3Q96S86 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
HAPLN3Q96S86 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HAPLN3Q96S86 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.33■□□□□ 0.21
HAPLN3Q96S86 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.33■□□□□ 0.21
HAPLN3Q96S86 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HAPLN3Q96S86 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HAPLN3Q96S86 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
HAPLN3Q96S86 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms