Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 PRYP5-201ENST00000451909 266 ntBASIC16■□□□□ 0.15
CHMP6Q96FZ7 AC245100.5-201ENST00000452108 331 ntBASIC16■□□□□ 0.15
CHMP6Q96FZ7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 AC064862.7-201ENST00000604520 867 ntBASIC16■□□□□ 0.15
CHMP6Q96FZ7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP6Q96FZ7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHMP6Q96FZ7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 LINC01230-201ENST00000625222 3017 ntBASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 AC023024.2-201ENST00000623561 1993 ntBASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 BEND3P1-201ENST00000421591 1944 ntBASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 ZBED1P1-201ENST00000502364 1930 ntBASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CHMP6Q96FZ7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CHMP6Q96FZ7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms