Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 AC087481.3-201ENST00000602886 1894 ntBASIC13.83□□□□□ -0.2
CPNE2Q96FN4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 IGHV3-22-201ENST00000520721 359 ntBASIC13.83□□□□□ -0.2
CPNE2Q96FN4 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CPNE2Q96FN4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 FAM45BP-202ENST00000592932 1624 ntBASIC13.82□□□□□ -0.2
CPNE2Q96FN4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CPNE2Q96FN4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AC025580.3-201ENST00000617932 1424 ntBASIC13.81□□□□□ -0.2
CPNE2Q96FN4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CPNE2Q96FN4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms