Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 AC098850.1-201ENST00000419919 790 ntBASIC15.32■□□□□ 0.04
RNF31Q96EP0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF31Q96EP0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF31Q96EP0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 AL513523.2-202ENST00000427283 2040 ntBASIC15.31■□□□□ 0.04
RNF31Q96EP0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF31Q96EP0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF31Q96EP0 LINC02228-204ENST00000642115 2962 ntBASIC15.3■□□□□ 0.04
RNF31Q96EP0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 KRT8P12-202ENST00000472924 1397 ntBASIC15.3■□□□□ 0.04
RNF31Q96EP0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF31Q96EP0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF31Q96EP0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms