Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 AC126365.1-201ENST00000578585 1514 ntBASIC14.25□□□□□ -0.13
PTP4A1Q93096 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.25□□□□□ -0.13
PTP4A1Q93096 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PTP4A1Q93096 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 RARRES2P8-201ENST00000566335 367 ntBASIC14.24□□□□□ -0.13
PTP4A1Q93096 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.24□□□□□ -0.13
PTP4A1Q93096 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.24□□□□□ -0.13
PTP4A1Q93096 CICP23-201ENST00000605013 2741 ntBASIC14.24□□□□□ -0.13
PTP4A1Q93096 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PTP4A1Q93096 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 AKAP8P1-201ENST00000434743 1349 ntBASIC14.23□□□□□ -0.13
PTP4A1Q93096 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PTP4A1Q93096 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 RPS8P6-201ENST00000426177 609 ntBASIC14.23□□□□□ -0.13
PTP4A1Q93096 DNAJB3-201ENST00000446806 729 ntBASIC14.23□□□□□ -0.13
PTP4A1Q93096 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.23□□□□□ -0.13
PTP4A1Q93096 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms