Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD2Q8NHY2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD2Q8NHY2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD2Q8NHY2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RFWD2Q8NHY2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.71■□□□□ 0.1
RFWD2Q8NHY2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD2Q8NHY2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.71■□□□□ 0.1
RFWD2Q8NHY2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD2Q8NHY2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD2Q8NHY2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AC004870.1-201ENST00000315132 882 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 HMGA1P7-201ENST00000406908 502 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AC073648.2-201ENST00000510116 352 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 RN7SL510P-201ENST00000581311 263 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AL365330.1-201ENST00000607459 531 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AC127383.1-201ENST00000444697 1800 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 MROH4P-201ENST00000431302 1578 ntBASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD2Q8NHY2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 MIR4515-201ENST00000584082 81 ntBASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 AL691432.3-201ENST00000621860 400 ntBASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RFWD2Q8NHY2 WASH6P-202ENST00000359512 1437 ntBASIC15.68■□□□□ 0.1
RFWD2Q8NHY2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD2Q8NHY2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD2Q8NHY2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD2Q8NHY2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD2Q8NHY2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD2Q8NHY2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms