Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC148Q8NFR7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 AP003680.1-201ENST00000598970 3660 ntBASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 MIR770-201ENST00000390219 98 ntBASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 TARDBPP1-201ENST00000442013 1203 ntBASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 PRAL-201ENST00000624952 3286 ntBASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC148Q8NFR7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 AC022144.1-201ENST00000602255 1580 ntBASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 AL607033.1-201ENST00000623900 1599 ntBASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 BTBD7P1-201ENST00000447253 1453 ntBASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 NORAD-201ENST00000565493 5339 ntBASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC148Q8NFR7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCDC148Q8NFR7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms