Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 AC112693.3-201ENST00000624819 1983 ntBASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 AC091951.1-201ENST00000512854 2465 ntBASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 HCG4B-203ENST00000450128 991 ntBASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 KRT18P34-201ENST00000488218 1270 ntBASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.9□□□□□ -0.02
PIK3C3Q8NEB9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC097376.2-205ENST00000610159 5334 ntBASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AL591424.1-201ENST00000442569 1213 ntBASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC096734.2-201ENST00000562054 433 ntBASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC106730.1-201ENST00000566722 1090 ntBASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 AC007064.4-201ENST00000637740 555 ntBASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.89□□□□□ -0.03
PIK3C3Q8NEB9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms