Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP000346.4-201ENST00000614827 381 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 AC091544.8-201ENST00000619490 361 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 AC128714.1-201ENST00000637035 887 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 TUBBP5-203ENST00000508529 1334 ntBASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 RN7SL769P-201ENST00000469386 295 ntBASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL27A1Q8IZC6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 AC103988.2-201ENST00000561804 725 ntBASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 RN7SL774P-201ENST00000577467 290 ntBASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 MIR4683-201ENST00000579659 81 ntBASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
COL27A1Q8IZC6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AL133499.1-201ENST00000596207 608 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC244452.3-201ENST00000636814 210 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 AC068587.8-201ENST00000641239 219 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 KRT8P4-201ENST00000509735 1454 ntBASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.5□□□□□ -0.09
COL27A1Q8IZC6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms