Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 AC092127.1-201ENST00000567093 3455 ntBASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 MIR3687-2-201ENST00000577708 61 ntBASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 MIR3687-1-201ENST00000614492 61 ntBASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 AC092865.6-201ENST00000642101 219 ntBASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CRLF3Q8IUI8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AC112693.3-201ENST00000624819 1983 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 C18orf15-201ENST00000623680 2534 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AC112482.1-201ENST00000492080 688 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 MTDHP5-201ENST00000598980 586 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AL365330.1-201ENST00000607459 531 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AC055717.3-201ENST00000622967 595 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AC010507.1-201ENST00000633895 436 ntBASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CRLF3Q8IUI8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CRLF3Q8IUI8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms