Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 MKNK2P1-201ENST00000437526 628 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AL031432.2-201ENST00000566714 459 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AL928711.1-201ENST00000570165 459 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CYP2A7P1-201ENST00000595391 815 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 AC090616.6-203ENST00000579186 1945 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 AC005622.1-201ENST00000636801 1703 ntBASIC14.15□□□□□ -0.14
LRRC28Q86X40 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRC28Q86X40 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRC28Q86X40 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LRRC28Q86X40 AC105250.1-201ENST00000509378 2057 ntBASIC14.14□□□□□ -0.15
LRRC28Q86X40 CICP4-201ENST00000447359 2812 ntBASIC14.14□□□□□ -0.15
LRRC28Q86X40 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 AC104581.4-201ENST00000623126 3052 ntBASIC14.14□□□□□ -0.15
LRRC28Q86X40 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 U82695.1-201ENST00000635752 1889 ntBASIC14.14□□□□□ -0.15
LRRC28Q86X40 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRRC28Q86X40 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRC28Q86X40 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 LINC00552-201ENST00000625151 2579 ntBASIC14.13□□□□□ -0.15
LRRC28Q86X40 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms