Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL138799.1-201ENST00000448213 1675 ntBASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MARK2P5-201ENST00000507649 634 ntBASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MIR3147-201ENST00000577811 66 ntBASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 DPM3-202ENST00000368399 517 ntBASIC10.78□□□□□ -0.68
CSMD3Q7Z407 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CSMD3Q7Z407 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
CSMD3Q7Z407 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
CSMD3Q7Z407 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CSMD3Q7Z407 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CSMD3Q7Z407 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
CSMD3Q7Z407 AC009090.5-201ENST00000624886 2285 ntBASIC10.77□□□□□ -0.68
CSMD3Q7Z407 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AL596276.2-201ENST00000447525 331 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AC234782.1-201ENST00000451950 919 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 PCBP2-OT1-201ENST00000634357 590 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AC020763.4-201ENST00000623414 4170 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AC008741.2-201ENST00000612792 3115 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AL161670.2-201ENST00000557650 1227 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 WDR7-208ENST00000589935 544 ntTSL 4 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 ENPP7P14-201ENST00000621765 1040 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 INE2-201ENST00000630399 1874 ntBASIC10.77□□□□□ -0.69
CSMD3Q7Z407 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CSMD3Q7Z407 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AL133267.1-201ENST00000398220 340 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 RPL17P45-201ENST00000586289 509 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC007663.3-201ENST00000609632 465 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AL158070.2-201ENST00000623713 1621 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms